WormBase Tree Display for Variation: WBVar00317275

WBVar00317275 Name: Public_name: tm4944
    Other_name: F13D2.2.1:c.432+62_658-20del
      F13D2.1a.1:c.814-3989_814-3476del
      F13D2.1b.1:c.814-3989_814-3476del
    HGVSg: CHROMOSOME_X:g.11179491_11180004del
  Sequence_details: SMap: S_parent: Sequence: F13D2
    Flanking_sequences: tcgttttccagttaagcgggattcgaaggt tattaatttttctgtttagcttcttgtatt
    Mapping_target: F13D2
    Source_location: 7 CHROMOSOME_X 11179490 11180005 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm4944_external
      tm4944_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 4944
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00008736
      WBGene00008735
    Transcript: F13D2.2.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F13D2.2.1:c.432+62_658-20del
        Intron_number: 3-4/9
        Exon_number: 4/10
      F13D2.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F13D2.1b.1:c.814-3989_814-3476del
        Intron_number: 9/38
      F13D2.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F13D2.1a.1:c.814-3989_814-3476del
        Intron_number: 8/37
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 12091/12092-12605/12606 (514 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele