WormBase Tree Display for Variation: WBVar00305069

WBVar00305069 Evidence: Paper_evidence: WBPaper00036201
  Name: Public_name: otn8248
    Other_name: OH7677_28352
      K01A2.8c.2:c.176+164A>T
      K01A2.4a.2:c.*95+454T>A
      K01A2.8c.3:c.176+164A>T
      K01A2.8d.1:c.323+164A>T
      K01A2.8c.1:c.176+164A>T
      K01A2.8a.1:c.308+164A>T
    HGVSg: CHROMOSOME_II:g.309998T>A
  Sequence_details: SMap: S_parent: Sequence: K01A2
    Flanking_sequences: TAACACTGCCCCCCCGGCGTTACTCCACTTTTAAAATTTAAAAACCAAAA TTCAGCCAAAACAATTGTCTTAATTTTAAAAAGTCTGTACCGACAATATC
    Mapping_target: K01A2
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00029537
    Laboratory: OTN
    Analysis: WGS_Hobert
    Status: Live
  Affects: Gene: WBGene00019279
      WBGene00019282
    Transcript: K01A2.8d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K01A2.8d.1:c.323+164A>T
        Intron_number: 3/4
      K01A2.8c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K01A2.8c.1:c.176+164A>T
        Intron_number: 3/5
      K01A2.8a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K01A2.8a.1:c.308+164A>T
        Intron_number: 4/6
      K01A2.8c.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K01A2.8c.2:c.176+164A>T
        Intron_number: 4/6
      K01A2.8c.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K01A2.8c.3:c.176+164A>T
        Intron_number: 4/6
      K01A2.4a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K01A2.4a.2:c.*95+454T>A
        Intron_number: 12/12
  Genetics: Map: II
  Reference: WBPaper00036201
  Method: WGS_Hobert