WormBase Tree Display for Variation: WBVar00299200

WBVar00299200 Evidence: Paper_evidence: WBPaper00036201
  Name: Public_name: otn2379
    Other_name: OH4240_262629
      T06H11.1d.1:c.293-3047A>T
      T06H11.1c.1:c.149-3047A>T
      T06H11.1f.1:c.413-3047A>T
      T06H11.1b.1:c.263-3047A>T
      T06H11.1g.1:c.136+1294A>T
    HGVSg: CHROMOSOME_X:g.10112378T>A
  Sequence_details: SMap: S_parent: Sequence: T06H11
    Flanking_sequences: TTCCTATTTTTTCGATTTTTTCGAATTTTTTGGAAAATCGAAATGTTAGT CTCCGTGAGGTATTAGACCATTAGTTGTATACATATCAAAAATTAAATTC
    Mapping_target: T06H11
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00029439
    Laboratory: OTN
    Analysis: WGS_Hobert
    Status: Live
  Affects: Gene: WBGene00006792
    Transcript: T06H11.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T06H11.1b.1:c.263-3047A>T
        Intron_number: 3/12
      T06H11.1g.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T06H11.1g.1:c.136+1294A>T
        Intron_number: 2/12
      T06H11.1f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T06H11.1f.1:c.413-3047A>T
        Intron_number: 4/14
      T06H11.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T06H11.1d.1:c.293-3047A>T
        Intron_number: 1/11
      T06H11.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T06H11.1c.1:c.149-3047A>T
        Intron_number: 2/13
  Genetics: Map: X
  Reference: WBPaper00036201
  Method: WGS_Hobert