WormBase Tree Display for Variation: WBVar00278344

WBVar00278344 Name: Public_name: ok2496
    HGVSg: CHROMOSOME_I:g.7643177_7644200del
  Sequence_details: SMap: S_parent: Sequence: F26A3
    Flanking_sequences: aaaagttgttaaaacaaaaggcttacctgg gacaaaaggataaagtcgacatttttctga
    Mapping_target: F26A3
    Type_of_mutation: Deletion
    PCR_product: OK2496_external
      OK2496_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00037018
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00009141
      WBGene00004508
    Transcript: F26A3.8a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 4353-?
        CDS_position: 4343-?
        Protein_position: 1448-?
        Intron_number: 19-20/21
        Exon_number: 19-22/22
      F26A3.8b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 4100-?
        CDS_position: 4100-?
        Protein_position: 1367-?
        Intron_number: 17-18/18
        Exon_number: 17-19/19
      F26A3.2a.2 VEP_consequence: coding_sequence_variant,5_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-152
        CDS_position: ?-65
        Protein_position: ?-22
        Exon_number: 1-2/6
      F26A3.2a.1 VEP_consequence: coding_sequence_variant,5_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-152
        CDS_position: ?-65
        Protein_position: ?-22
        Exon_number: 1-2/6
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele