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WormBase Tree Display for Variation: WBVar00278329

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Name Class

WBVar00278329EvidencePaper_evidenceWBPaper00004490
NamePublic_nameq247
Other_nameCE39287:p.Arg129Ter
Y113G7B.5b.1:c.385C>T
Y113G7B.5a.1:c.385C>T
CE23287:p.Arg129Ter
HGVSgCHROMOSOME_V:g.20199856C>T
Sequence_detailsSMapS_parentSequenceY113G7B
Flanking_sequencesttggcagtaattgtgaagaatccaaaacttgattggataattttgttatcgtctcttcac
Mapping_targetY113G7B
Type_of_mutationSubstitutionctPaper_evidenceWBPaper00004490
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryJK
StatusLive
AffectsGeneWBGene00001482
TranscriptY113G7B.5b.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScY113G7B.5b.1:c.385C>T
HGVSpCE39287:p.Arg129Ter
cDNA_position417
CDS_position385
Protein_position129
Exon_number4/6
Codon_changeCga/Tga
Amino_acid_changeR/*
Y113G7B.5a.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScY113G7B.5a.1:c.385C>T
HGVSpCE23287:p.Arg129Ter
cDNA_position425
CDS_position385
Protein_position129
Exon_number4/7
Codon_changeCga/Tga
Amino_acid_changeR/*
GeneticsInterpolated_map_positionV24.9207
DescriptionPhenotypeWBPhenotype:0001683Paper_evidenceWBPaper00001037
Curator_confirmedWBPerson2021
RemarkThere is no evidence of sperm, spermatogenesis, or germ cell death in fog-2 XX mutants. Further, oogenesis begins in fog-2 mutants at about the time spermatogenesis begins in wild type. fog-2 X0 males are unaffectedPaper_evidenceWBPaper00001037
Curator_confirmedWBPerson2021
PenetranceCompletePaper_evidenceWBPaper00001037
Curator_confirmedWBPerson2021
RecessivePaper_evidenceWBPaper00001037
Curator_confirmedWBPerson2021
Variation_effectProbable_null_via_phenotypePaper_evidenceWBPaper00001037
Curator_confirmedWBPerson2021
ReferenceWBPaper00001037
WBPaper00004490
MethodSubstitution_allele