WormBase Tree Display for Variation: WBVar00277986
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WBVar00277986 | Evidence | Paper_evidence | WBPaper00036200 | ||
---|---|---|---|---|---|
Name | Public_name | gk2967 | |||
Other_name | Y62E10A.9.1:c.364+188G>A | ||||
Y62E10A.9.2:c.364+188G>A | |||||
HGVSg | CHROMOSOME_IV:g.13383256C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y62E10A | |
Flanking_sequences | CAAAATTAATTAGCGAAATTGATGAAAAAT | ATGAATTTTAGCCAAAAATAAATGCAAAAT | |||
Mapping_target | Y62E10A | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00005866 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
Analysis | Million_Mutation_Pilot_Project | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00004278 | |||
Transcript | Y62E10A.9.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y62E10A.9.2:c.364+188G>A | ||||
Intron_number | 5/7 | ||||
Y62E10A.9.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y62E10A.9.1:c.364+188G>A | ||||
Intron_number | 4/6 | ||||
Isolation | Mutagen | EMS | |||
Reference | WBPaper00036200 | ||||
Remark | Allele identified through whole-genome sequencing by the Gene Knockout Consortium | Paper_evidence | WBPaper00036200 | ||
Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
Method | KO_consortium_allele |