WormBase Tree Display for Variation: WBVar00277294
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WBVar00277294 | Evidence | Paper_evidence | WBPaper00036200 | ||
---|---|---|---|---|---|
Name | Public_name | gk2045 | |||
Other_name | M6.1e.1:c.220+415G>A | ||||
M6.1a.1:c.-15+415G>A | |||||
HGVSg | CHROMOSOME_X:g.651634C>T | ||||
Sequence_details | SMap | S_parent | Sequence | T19D7 | |
Flanking_sequences | CATCAGCATTTCGGTTAGTGAATAAAATAT | CGCAATCAGTGTTTAACATGCCTTTTTCCG | |||
Mapping_target | T19D7 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00036970 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
Analysis | Million_Mutation_Pilot_Project | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00002056 | |||
Transcript | M6.1e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | M6.1e.1:c.220+415G>A | ||||
Intron_number | 3/23 | ||||
M6.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | M6.1a.1:c.-15+415G>A | ||||
Intron_number | 3/20 | ||||
Isolation | Mutagen | EMS | |||
Reference | WBPaper00036200 | ||||
Remark | Allele identified through whole-genome sequencing by the Gene Knockout Consortium | Paper_evidence | WBPaper00036200 | ||
Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
Method | KO_consortium_allele |