WormBase Tree Display for Variation: WBVar00277136

WBVar00277136 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: ok5806
    Other_name: R186.5c.1:c.45-2320C>T
      R186.5b.1:c.53+1896C>T
      R186.5a.2:c.-11+1896C>T
      R186.5a.1:c.-10-2320C>T
    HGVSg: CHROMOSOME_V:g.12978661G>A
  Sequence_details: SMap: S_parent: Sequence: R186
    Flanking_sequences: TATCGTTTCAGGCTATTTTGATTATAATCA TTATTCCTAATGTAAGAAAATACTCCGTTT
    Mapping_target: R186
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00033306
    Laboratory: RB
    Person: WBPerson46
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00004793
    Transcript: R186.5c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R186.5c.1:c.45-2320C>T
        Intron_number: 1/9
      R186.5b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R186.5b.1:c.53+1896C>T
        Intron_number: 1/9
      R186.5a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R186.5a.2:c.-11+1896C>T
        Intron_number: 1/11
      R186.5a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R186.5a.1:c.-10-2320C>T
        Intron_number: 1/11
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele