WormBase Tree Display for Variation: WBVar00277060

WBVar00277060 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: ok5028
    Other_name: R05D7.3c.1:c.559+51G>A
      R05D7.3a.5:c.436+51G>A
      R05D7.3a.4:c.436+51G>A
      R05D7.3a.6:c.436+51G>A
      R05D7.3e.1:c.508+51G>A
      R05D7.3b.1:c.661+51G>A
      R05D7.3a.1:c.436+51G>A
      R05D7.3d.1:c.535+51G>A
      R05D7.3a.2:c.436+51G>A
      R05D7.3a.3:c.436+51G>A
    HGVSg: CHROMOSOME_I:g.12169181C>T
  Sequence_details: SMap: S_parent: Sequence: R05D7
    Flanking_sequences: TTTGCTGATTGGTCGGCCCTGGCCAGTCAG AAATCCGGACCAAAGTCGCTGATTGGTCCC
    Mapping_target: R05D7
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00033304
    Laboratory: RB
    Person: WBPerson46
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00011028
    Transcript: R05D7.3a.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R05D7.3a.3:c.436+51G>A
        Intron_number: 6/7
      R05D7.3c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R05D7.3c.1:c.559+51G>A
        Intron_number: 5/5
      R05D7.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R05D7.3b.1:c.661+51G>A
        Intron_number: 6/6
      R05D7.3a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R05D7.3a.2:c.436+51G>A
        Intron_number: 6/7
      R05D7.3e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R05D7.3e.1:c.508+51G>A
        Intron_number: 5/5
      R05D7.3a.5 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R05D7.3a.5:c.436+51G>A
        Intron_number: 6/7
      R05D7.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R05D7.3a.1:c.436+51G>A
        Intron_number: 7/8
      R05D7.3a.6 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R05D7.3a.6:c.436+51G>A
        Intron_number: 5/6
      R05D7.3a.4 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R05D7.3a.4:c.436+51G>A
        Intron_number: 6/7
      R05D7.3d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R05D7.3d.1:c.535+51G>A
        Intron_number: 5/5
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele