WormBase Tree Display for Variation: WBVar00276940

WBVar00276940 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: gk1606
    Other_name: K09E9.1c.1:c.1198-56C>T
      K09E9.1b.1:c.1420-56C>T
      K09E9.1a.2:c.1390-56C>T
      K09E9.1a.1:c.1390-56C>T
    HGVSg: CHROMOSOME_X:g.15626043C>T
  Sequence_details: SMap: S_parent: Sequence: K09E9
    Flanking_sequences: AATGTGTAGAATTAGTAGAGGAGAGTAGAA TTGCCCGAAAATTCTGAAAAACCATACTCG
    Mapping_target: K09E9
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036969
    Laboratory: VC
    Person: WBPerson427
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00010724
    Transcript: K09E9.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K09E9.1a.1:c.1390-56C>T
        Intron_number: 10/12
      K09E9.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K09E9.1c.1:c.1198-56C>T
        Intron_number: 7/8
      K09E9.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K09E9.1b.1:c.1420-56C>T
        Intron_number: 9/10
      K09E9.1a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K09E9.1a.2:c.1390-56C>T
        Intron_number: 9/11
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele