WormBase Tree Display for Variation: WBVar00276195
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WBVar00276195 | Evidence | Paper_evidence | WBPaper00036200 | ||
---|---|---|---|---|---|
Name | Public_name | gk1381 | |||
Other_name | CE36992:p.Arg256= | ||||
D1069.3b.2:c.768T>A | |||||
D1069.3b.1:c.768T>A | |||||
HGVSg | CHROMOSOME_II:g.345074A>T | ||||
Sequence_details | SMap | S_parent | Sequence | D1069 | |
Flanking_sequences | ATGATTCAAAAACTCTCCGGACACTTGCTG | CGTGGTTTTTTTGAAAAATCTTCGATAATC | |||
Mapping_target | D1069 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00036969 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
Analysis | Million_Mutation_Pilot_Project | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00017037 | |||
Transcript | D1069.3b.2 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | D1069.3b.2:c.768T>A | ||||
HGVSp | CE36992:p.Arg256= | ||||
cDNA_position | 855 | ||||
CDS_position | 768 | ||||
Protein_position | 256 | ||||
Exon_number | 7/13 | ||||
Codon_change | cgT/cgA | ||||
Amino_acid_change | R | ||||
D1069.3b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | D1069.3b.1:c.768T>A | ||||
HGVSp | CE36992:p.Arg256= | ||||
cDNA_position | 885 | ||||
CDS_position | 768 | ||||
Protein_position | 256 | ||||
Exon_number | 7/12 | ||||
Codon_change | cgT/cgA | ||||
Amino_acid_change | R | ||||
Isolation | Mutagen | EMS | |||
Reference | WBPaper00036200 | ||||
Remark | Allele identified through whole-genome sequencing by the Gene Knockout Consortium | Paper_evidence | WBPaper00036200 | ||
Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
Method | KO_consortium_allele |