WormBase Tree Display for Variation: WBVar00276034
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| WBVar00276034 | Evidence | Paper_evidence | WBPaper00036200 | ||
|---|---|---|---|---|---|
| Name | Public_name | ok5684 | |||
| Other_name | C39H7.5.1:c.220+5G>A | ||||
| HGVSg | CHROMOSOME_IV:g.5626490C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C39H7 | |
| Flanking_sequences | TCAATTATTTAGAAACTATAAAAATACAAT | TTACCAGCTACGCTGAAACTCATATCCACA | |||
| Mapping_target | C39H7 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00033306 | ||||
| Laboratory | RB | ||||
| Person | WBPerson46 | ||||
| Analysis | Million_Mutation_Pilot_Project | ||||
| KO_consortium_allele | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00016543 | |||
| Transcript | C39H7.5.1 | VEP_consequence | splice_region_variant,intron_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C39H7.5.1:c.220+5G>A | ||||
| Intron_number | 2/4 | ||||
| Isolation | Mutagen | EMS | |||
| Reference | WBPaper00036200 | ||||
| Remark | Allele identified through whole-genome sequencing by the Gene Knockout Consortium | Paper_evidence | WBPaper00036200 | ||
| Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
| Method | KO_consortium_allele |
