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WormBase Tree Display for Variation: WBVar00275555

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Name Class

WBVar00275555EvidencePaper_evidenceWBPaper00035924
NamePublic_namezu456
Other_nameCE00638:p.Met1?
T07C4.1.1:c.1_2delinsTA
HGVSgCHROMOSOME_III:g.10357642_10357643delinsTA
Sequence_detailsSMapS_parentSequenceC38H2
Flanking_sequencesatcaaaaagtaatcgtactattcagagaaagagctcgctcaccgacaaaacccgaaatgg
Mapping_targetC38H2
Type_of_mutationSubstitutionattaPaper_evidenceWBPaper00035924
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00007858
LaboratoryJJ
StatusLive
AffectsGeneWBGene00011559
TranscriptT07C4.1.1VEP_consequencestop_gained,start_lost
VEP_impactHIGH
HGVScT07C4.1.1:c.1_2delinsTA
HGVSpCE00638:p.Met1?
cDNA_position6-7
CDS_position1-2
Protein_position1
Exon_number2/6
Codon_changeATg/TAg
Amino_acid_changeM/*
InteractorWBInteraction000051741
WBInteraction000051742
WBInteraction000051744
WBInteraction000051747
GeneticsInterpolated_map_positionIII2.47294
Disease_infoModels_diseaseDOID:0050833
Models_disease_in_annotationWBDOannot00000005
ReferenceWBPaper00035924
MethodSubstitution_allele