WormBase Tree Display for Variation: WBVar00275555
expand all nodes | collapse all nodes | view schema
WBVar00275555 | Evidence | Paper_evidence | WBPaper00035924 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | zu456 | |||||
Other_name | CE00638:p.Met1? | ||||||
T07C4.1.1:c.1_2delinsTA | |||||||
HGVSg | CHROMOSOME_III:g.10357642_10357643delinsTA | ||||||
Sequence_details | SMap | S_parent | Sequence | C38H2 | |||
Flanking_sequences | atcaaaaagtaatcgtactattcagagaaa | gagctcgctcaccgacaaaacccgaaatgg | |||||
Mapping_target | C38H2 | ||||||
Type_of_mutation | Substitution | at | ta | Paper_evidence | WBPaper00035924 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00007858 | ||||||
Laboratory | JJ | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00011559 | |||||
Transcript | T07C4.1.1 | VEP_consequence | stop_gained,start_lost | ||||
VEP_impact | HIGH | ||||||
HGVSc | T07C4.1.1:c.1_2delinsTA | ||||||
HGVSp | CE00638:p.Met1? | ||||||
cDNA_position | 6-7 | ||||||
CDS_position | 1-2 | ||||||
Protein_position | 1 | ||||||
Exon_number | 2/6 | ||||||
Codon_change | ATg/TAg | ||||||
Amino_acid_change | M/* | ||||||
Interactor | WBInteraction000051741 | ||||||
WBInteraction000051742 | |||||||
WBInteraction000051744 | |||||||
WBInteraction000051747 | |||||||
Genetics | Interpolated_map_position | III | 2.47294 | ||||
Disease_info | Models_disease | DOID:0050833 | |||||
Models_disease_in_annotation | WBDOannot00000005 | ||||||
Reference | WBPaper00035924 | ||||||
Method | Substitution_allele |