WormBase Tree Display for Variation: WBVar00275302
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WBVar00275302 | Evidence | Paper_evidence | WBPaper00001691 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | y52 | |||||
Other_name | CE08389:p.Pro1516Ser | ||||||
C25D7.3.1:c.4546C>T | |||||||
HGVSg | CHROMOSOME_V:g.15042018G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | C25D7 | |||
Flanking_sequences | aagaaacgaggacgccgaaggaagaaaact | caccgcatattgctaaggccagaaaagttt | |||||
Mapping_target | C25D7 | ||||||
Type_of_mutation | Substitution | c | t | ||||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00003933 | ||||||
WBStrain00004652 | |||||||
WBStrain00035106 | |||||||
WBStrain00035110 | |||||||
Laboratory | TY | ||||||
Status | Live | ||||||
Linked_to | WBVar00275303 | ||||||
Affects | Gene | WBGene00004747 | |||||
WBGene00305285 | |||||||
Transcript | C25D7.3.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | ||||||
HGVSc | C25D7.3.1:c.4546C>T | ||||||
HGVSp | CE08389:p.Pro1516Ser | ||||||
cDNA_position | 4658 | ||||||
CDS_position | 4546 | ||||||
Protein_position | 1516 | ||||||
Exon_number | 10/17 | ||||||
Codon_change | Cca/Tca | ||||||
Amino_acid_change | P/S | ||||||
C25D7.19 | |||||||
Interactor | WBInteraction000500364 | ||||||
WBInteraction000521841 | |||||||
Genetics | Interpolated_map_position | V | 7.19133 | ||||
Mapping_data | In_multi_point | 1915 | |||||
Description | Phenotype | WBPhenotype:0000822 | Paper_evidence | WBPaper00001691 | |||
Curator_confirmed | WBPerson712 | ||||||
WBPhenotype:0001277 | Paper_evidence | WBPaper00001691 | |||||
WBPaper00001708 | |||||||
Curator_confirmed | WBPerson712 | ||||||
WBPhenotype:0001572 | Person_evidence | WBPerson261 | |||||
Curator_confirmed | WBPerson712 | ||||||
Phenotype_not_observed | WBPhenotype:0000066 | Person_evidence | WBPerson261 | ||||
Curator_confirmed | WBPerson712 | ||||||
Remark | XX viable, masculinized | Person_evidence | WBPerson261 | ||||
Curator_confirmed | WBPerson712 | ||||||
Reference | WBPaper00014003 | ||||||
WBPaper00014084 | |||||||
WBPaper00017413 | |||||||
WBPaper00001708 | |||||||
WBPaper00001691 | |||||||
WBPaper00014204 | |||||||
WBPaper00013845 | |||||||
Method | Substitution_allele |