WormBase Tree Display for Variation: WBVar00275173
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| WBVar00275173 | Evidence | Paper_evidence | WBPaper00025090 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | wk61 | |||||
| Other_name | F58H12.1.1:c.820C>T | ||||||
| CE28479:p.Gln274Ter | |||||||
| HGVSg | CHROMOSOME_X:g.2849321G>A | ||||||
| Sequence_details | SMap | S_parent | Sequence | F53B3 | |||
| Flanking_sequences | acacagatggatgcacatccgagatgatgtg | aaaaaaatcaagcggcgcaactcctggaagc | |||||
| Mapping_target | F53B3 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00025090 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | LT | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00002210 | |||||
| Transcript | F58H12.1.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | F58H12.1.1:c.820C>T | ||||||
| HGVSp | CE28479:p.Gln274Ter | ||||||
| cDNA_position | 871 | ||||||
| CDS_position | 820 | ||||||
| Protein_position | 274 | ||||||
| Exon_number | 9/18 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| Interactor | WBInteraction000500840 | ||||||
| WBInteraction000502077 | |||||||
| WBInteraction000518519 | |||||||
| Isolation | Mutagen | EMS | |||||
| Genetics | Interpolated_map_position | X | -12.6984 | ||||
| Description | Phenotype (5) | ||||||
| Phenotype_not_observed | WBPhenotype:0000070 | Paper_evidence | WBPaper00005858 | ||||
| Curator_confirmed | WBPerson712 | ||||||
| WBPhenotype:0000296 | Paper_evidence | WBPaper00025090 | |||||
| Curator_confirmed | WBPerson2021 | ||||||
| Remark | No crumpled spicules | Paper_evidence | WBPaper00025090 | ||||
| Curator_confirmed | WBPerson2021 | ||||||
| Variation_effect | Probable_null_via_phenotype | Paper_evidence | WBPaper00025090 | ||||
| Curator_confirmed | WBPerson2021 | ||||||
| WBPhenotype:0000297 | Paper_evidence | WBPaper00025090 | |||||
| Curator_confirmed | WBPerson2021 | ||||||
| Remark | kin-29 mutants do not display male tail ray fusions | Paper_evidence | WBPaper00025090 | ||||
| Curator_confirmed | WBPerson2021 | ||||||
| Variation_effect | Probable_null_via_phenotype | Paper_evidence | WBPaper00025090 | ||||
| Curator_confirmed | WBPerson2021 | ||||||
| Reference | WBPaper00005858 | ||||||
| WBPaper00025090 | |||||||
| Method | Substitution_allele |
