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WormBase Tree Display for Variation: WBVar00272056

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Name Class

WBVar00272056EvidencePaper_evidenceWBPaper00005369
NamePublic_nameWBVar00272056
Other_nameuCE5-1396
F26F12.3b.2:c.2337-209del
F26F12.3b.1:c.2337-209del
F26F12.3b.3:c.2337-209del
F26F12.3a.1:c.2592-209del
F26F12.3c.1:c.1866-209del
HGVSgCHROMOSOME_V:g.5840122del
Sequence_detailsSMapS_parentSequenceF26F12
Flanking_sequencesCCATTGAAAGAGGGCGTTTGAAATAGGCCACTACATAAATTCAGCAGCAGAGGGAAACTTTTAGAAAAAAGTTCTAAAGAATCTAAATCTAGAAAAAAAACATCTAAAACTAAATCTAGAATCTAAAAATTCTCCAGTGCATAATTTCACAATTTTAGAGGCTCTTAAAATTTCTCTCACTGTTGATTTTCGTGTCTGAG
Mapping_targetF26F12
Type_of_mutationDeletionA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Swan
AnalysisSNP_Swan
StatusLive
AffectsGeneWBGene00017834
TranscriptF26F12.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF26F12.3b.1:c.2337-209del
Intron_number5/6
F26F12.3b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF26F12.3b.2:c.2337-209del
Intron_number5/6
F26F12.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF26F12.3a.1:c.2592-209del
Intron_number5/6
F26F12.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF26F12.3c.1:c.1866-209del
Intron_number5/6
F26F12.3b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF26F12.3b.3:c.2337-209del
Intron_number4/5
ReferenceWBPaper00005369
MethodSNP_Swan