WormBase Tree Display for Variation: WBVar00271932
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WBVar00271932 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00271932 | |||
Other_name | uCE5-1259 | ||||
cewivar00575751 | |||||
Y58A7A.3.1:c.1917G>A | |||||
CE26196:p.Arg639= | |||||
Y58A7A.3.2:c.1917G>A | |||||
HGVSg | CHROMOSOME_V:g.5078712C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y58A7A | |
Flanking_sequences | ACTGATGAAACTGATGAAACTTACATCTCAGGTGCCACTTCTTTTCCCATTCAGCATAATTTTCACAATTCATTGGCCAATGAGGTACTCCCTTGCAATC | CGACACCAAGAATATCCACATGGACATGAACGATTTTGAGTTTTATTTTCATTCCCTGGTTCTTCGAAAAATATAGTTGACTTGCAAGAAGGGCACTTTT | |||
Mapping_target | Y58A7A | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
Analysis | SNP_Swan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00021977 | |||
Transcript | Y58A7A.3.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y58A7A.3.1:c.1917G>A | ||||
HGVSp | CE26196:p.Arg639= | ||||
cDNA_position | 1996 | ||||
CDS_position | 1917 | ||||
Protein_position | 639 | ||||
Exon_number | 6/8 | ||||
Codon_change | cgG/cgA | ||||
Amino_acid_change | R | ||||
Y58A7A.3.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | Y58A7A.3.2:c.1917G>A | ||||
HGVSp | CE26196:p.Arg639= | ||||
cDNA_position | 1989 | ||||
CDS_position | 1917 | ||||
Protein_position | 639 | ||||
Exon_number | 6/8 | ||||
Codon_change | cgG/cgA | ||||
Amino_acid_change | R | ||||
Reference | WBPaper00005369 | ||||
Method | SNP_Swan |