WormBase Tree Display for Variation: WBVar00268822
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WBVar00268822 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00268822 | |||
Other_name | uCE2-1750 | ||||
F18A1.4b.1:c.694-4del | |||||
F18A1.4a.1:c.892-4del | |||||
HGVSg | CHROMOSOME_II:g.7669842del | ||||
Sequence_details | SMap | S_parent | Sequence | F18A1 | |
Flanking_sequences | TTATTTGATTCTAACTATTATAAGCTAAATCAGGTAGCAAATGAAGGCAGAATAAGTTTCATGTTAGTTCAAAACGAAATTTTAAAAAAATTTATAATTT | CAGATTGATCATGGATTCTCTCGATTTCAGCACATCGGAAGTTCGGATATGGTGGCATCGTCTATCAGAACTGGTCAGTGTAAAAAACTTCCCAAATTGT | |||
Mapping_target | F18A1 | ||||
Type_of_mutation | Deletion | T | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
Analysis | SNP_Swan | ||||
Status | Live | ||||
Affects | Gene | WBGene00003045 | |||
Transcript | F18A1.4b.1 | VEP_consequence | splice_region_variant,intron_variant | ||
VEP_impact | LOW | ||||
HGVSc | F18A1.4b.1:c.694-4del | ||||
Intron_number | 4/8 | ||||
F18A1.4a.1 | VEP_consequence | splice_region_variant,intron_variant | |||
VEP_impact | LOW | ||||
HGVSc | F18A1.4a.1:c.892-4del | ||||
Intron_number | 5/9 | ||||
Reference | WBPaper00005369 | ||||
Method | SNP_Swan |