WormBase Tree Display for Variation: WBVar00268043
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WBVar00268043 | Name | Public_name | WBVar00268043 | ||
---|---|---|---|---|---|
Other_name | uCE2-878 | ||||
haw125570 | |||||
cewivar00178244 | |||||
F36H5.5.1:c.-1268C>T | |||||
HGVSg | CHROMOSOME_II:g.1757060C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F36H5 | |
Flanking_sequences | CTTTCGAAGCTAGTACTTGCTTATCTTTCATCCATTACTCCTTCCTGGCCCAGAAAACTCCTCAAGCTGTTGTTGCTAAGTTTGTCGGGACCACTGGTGT | ATTGATGCGTTGCGCAACAATGTCTAGGCCATATTTTTCGGGTGTCTTCTAACGATTTTGTTGATTCTGCGATTTTATAAAAGAAAGCAGTACACAATCA | |||
Mapping_target | F36H5 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis (4) | |||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis (2) | ||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | AX | ||||
Person | WBPerson4037 | ||||
Analysis | SNP_Swan | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01361409 | |||
WBVar01296210 | |||||
WBVar00545435 | |||||
Status | Live | ||||
Affects | Gene | WBGene00018104 | |||
Transcript | F36H5.5.1 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F36H5.5.1:c.-1268C>T | ||||
cDNA_position | 179 | ||||
Exon_number | 1/4 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
WBPaper00005369 | |||||
Method | SNP_Swan |