WormBase Tree Display for Variation: WBVar00266484
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| WBVar00266484 | Evidence | Paper_evidence | WBPaper00005563 | ||
|---|---|---|---|---|---|
| Name | Public_name | tz2 | |||
| Other_name | Y41C4A.4a.1:c.858+3_*101del | ||||
| Y41C4A.4g.1:c.1167+3_*101del | |||||
| Y41C4A.4e.1:c.801+3_*101del | |||||
| Y41C4A.4d.1:c.876+3_*101del | |||||
| Y41C4A.4f.1:c.450+3_*101del | |||||
| HGVSg | CHROMOSOME_III:g.11692677_11693655del | ||||
| Sequence_details | SMap | S_parent | Sequence | Y41C4A | |
| Flanking_sequences | agcgaaagagtgccgcagaaaaaagaaggt | atttcctaatttttgaaagaaaaaaaattg | |||
| Mapping_target | Y41C4A | ||||
| Type_of_mutation | Deletion | ||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00040751 | ||||
| WBStrain00047812 | |||||
| Laboratory | YT | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00000793 | |||
| Transcript | Y41C4A.4e.1 | VEP_consequence | splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | ||
| VEP_impact | HIGH | ||||
| HGVSc | Y41C4A.4e.1:c.801+3_*101del | ||||
| cDNA_position | ?-1082 | ||||
| Intron_number | 7/8 | ||||
| Exon_number | 8-9/9 | ||||
| Y41C4A.4g.1 | VEP_consequence | splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | Y41C4A.4g.1:c.1167+3_*101del | ||||
| cDNA_position | ?-1388 | ||||
| Intron_number | 5/6 | ||||
| Exon_number | 6-7/7 | ||||
| Y41C4A.4b.1 | VEP_consequence | splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| Intron_number | 6/6 | ||||
| Exon_number | 7/7 | ||||
| Y41C4A.4a.1 | VEP_consequence | splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | Y41C4A.4a.1:c.858+3_*101del | ||||
| cDNA_position | ?-1181 | ||||
| Intron_number | 7/8 | ||||
| Exon_number | 8-9/9 | ||||
| Y41C4A.4d.1 | VEP_consequence | splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | Y41C4A.4d.1:c.876+3_*101del | ||||
| cDNA_position | ?-1197 | ||||
| Intron_number | 7/8 | ||||
| Exon_number | 8-9/9 | ||||
| Y41C4A.4f.1 | VEP_consequence | splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | Y41C4A.4f.1:c.450+3_*101del | ||||
| cDNA_position | ?-937 | ||||
| Intron_number | 4/5 | ||||
| Exon_number | 5-6/6 | ||||
| Y41C4A.4c.1 | VEP_consequence | splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| Intron_number | 6/6 | ||||
| Exon_number | 7/7 | ||||
| Interactor | WBInteraction000546931 | ||||
| Genetics | Interpolated_map_position | III | 11.7926 | ||
| Description (2) | |||||
| Reference | WBPaper00039821 | ||||
| WBPaper00039855 | |||||
| WBPaper00040253 | |||||
| WBPaper00010064 | |||||
| WBPaper00005563 | |||||
| WBPaper00036296 | |||||
| WBPaper00046360 | |||||
| WBPaper00049050 | |||||
| WBPaper00041586 | |||||
| WBPaper00049891 | |||||
| Method | Deletion_allele |
