WormBase Tree Display for Variation: WBVar00253050

WBVar00253050 Name: Public_name: tm4681
    Other_name: F32H2.2b.1:c.29-59_149delinsT
    HGVSg: CHROMOSOME_I:g.8966238_8966524delinsT
  Sequence_details: SMap: S_parent: Sequence: F32H2
    Flanking_sequences: caccgtataggtgaaaaaaggtcataatat tttcaaagaagaatattttgtcaactatct
    Mapping_target: F32H2
    Source_location: 7 CHROMOSOME_I 8966237 8966525 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: T
      Deletion
    PCR_product: tm4681_external
      tm4681_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 4681
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00007026
    Transcript: F32H2.2b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F32H2.2b.1:c.29-59_149delinsT
        cDNA_position: ?-165
        CDS_position: ?-149
        Protein_position: ?-50
        Intron_number: 2-3/5
        Exon_number: 3-4/6
      F32H2.2a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-111
        CDS_position: ?-110
        Protein_position: ?-37
        Intron_number: 2/4
        Exon_number: 1-3/5
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 7039/7040-T-7326/7327 (287 bp deletion + 1 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele