WormBase Tree Display for Variation: WBVar00252823

WBVar00252823 Name: Public_name: tm4318
    Other_name: F12B6.3a.1:c.1086_1281+216del
      F12B6.3b.1:c.1008_1203+216del
    HGVSg: CHROMOSOME_I:g.2246382_2246793del
  Sequence_details: SMap: S_parent: Sequence: F12B6
    Flanking_sequences: cgtgtcgtctccgccaccaccggctccgct gtaaggctactgtaggagtactgtgtggct
    Mapping_target: F12B6
    Source_location: 7 CHROMOSOME_I 2246381 2246794 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm4318_external
      tm4318_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 4318
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00017399
    Transcript: F12B6.3b.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F12B6.3b.1:c.1008_1203+216del
        cDNA_position: 1008-?
        CDS_position: 1008-?
        Protein_position: 336-?
        Intron_number: 6/6
        Exon_number: 6/7
      F12B6.3a.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F12B6.3a.1:c.1086_1281+216del
        cDNA_position: 1086-?
        CDS_position: 1086-?
        Protein_position: 362-?
        Intron_number: 7/7
        Exon_number: 7/8
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 6856/6857-7268/7269 (412 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele