WormBase Tree Display for Variation: WBVar00252483

WBVar00252483 Name: Public_name: tm3899
    Other_name: C37A2.7.1:c.82+9_*5del
    HGVSg: CHROMOSOME_I:g.6789157_6789646del
  Sequence_details: SMap: S_parent: Sequence: C37A2
    Flanking_sequences: tcattgaatgacgaataacaactttaacaa aaacttaccgaggaccttaaggacatcttg
    Mapping_target: C37A2
    Source_location: 7 CHROMOSOME_I 6789156 6789647 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm3899_external
      tm3899_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 3899
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00016493
    Transcript: C37A2.7.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C37A2.7.1:c.82+9_*5del
        cDNA_position: ?-331
        Intron_number: 2-3/4
        Exon_number: 3-5/5
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson2021
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson2021
  Remark: 14714/14715-15204/15205 (490 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele