WormBase Tree Display for Variation: WBVar00252218

WBVar00252218 Name: Public_name: tm3561
    Other_name (32)
    HGVSg: CHROMOSOME_V:g.11115926_11116619del
  Sequence_details: SMap: S_parent: Sequence: H19N07
    Flanking_sequences: GTTGGTCTACGTCCGTGATAACGCGATTGA CAATGACCGACAAGTTTACTATCATCGGCC
    Mapping_target: H19N07
    Type_of_mutation: Insertion: CA
      Deletion
    PCR_product: tm3561_external
      tm3561_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 3561
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00010406
    Transcript (16)
  Isolation: Mutagen: TMP/UV
  Genetics: Map: V
  Description: Phenotype: WBPhenotype:0000013 Person_evidence: WBPerson9926
        Curator_confirmed: WBPerson9926
        Temperature_sensitive: Cold_sensitive: Person_evidence: WBPerson9926
              Curator_confirmed: WBPerson9926
      WBPhenotype:0000050 Paper_evidence: WBPaper00041782
        Curator_confirmed: WBPerson9926
        Remark: Approximately 50% Emb lethal at 16C, 25% at other temperatures Paper_evidence: WBPaper00041782
            Curator_confirmed: WBPerson9926
        Temperature_sensitive: Cold_sensitive: Paper_evidence: WBPaper00041782
              Curator_confirmed: WBPerson9926
      WBPhenotype:0000054 Paper_evidence: WBPaper00041782
        Curator_confirmed: WBPerson9926
        Remark: low penetrance Paper_evidence: WBPaper00041782
            Curator_confirmed: WBPerson9926
        Temperature_sensitive: Cold_sensitive: Paper_evidence: WBPaper00041782
              Curator_confirmed: WBPerson9926
      WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal or sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Paper_evidence: WBPaper00041782
        Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
          WBPerson9926
        Remark: Classified as lethal or sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
          low penetrance Paper_evidence: WBPaper00041782
            Curator_confirmed: WBPerson9926
        Temperature_sensitive: Cold_sensitive: Paper_evidence: WBPaper00041782
              Curator_confirmed: WBPerson9926
      WBPhenotype:0001123 Paper_evidence: WBPaper00041782
        Curator_confirmed: WBPerson9926
        Remark: very low penetrance at 16C Paper_evidence: WBPaper00041782
            Curator_confirmed: WBPerson9926
        Temperature_sensitive: Cold_sensitive: Paper_evidence: WBPaper00041782
              Curator_confirmed: WBPerson9926
  Reference: WBPaper00041782
  Remark: 6272/6273-CA-6966/6967 (694 bp deletion + 2 bp insertion)
    This knockout was generated by the National BioResource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. PMID 23173093 Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele