WormBase Tree Display for Variation: WBVar00252020

WBVar00252020 Name: Public_name: tm3293
    Other_name: F59C6.7a.1:c.476+6_840+55del
      F59C6.7b.1:c.215+6_579+55del
    HGVSg: CHROMOSOME_I:g.10507650_10508157del
  Sequence_details: SMap: S_parent: Sequence: F59C6
    Flanking_sequences: taatttgaatccccacgcattcacgagcgt catacttctgccactgaaatcctacatgaa
    Mapping_target: F59C6
    Source_location: 7 CHROMOSOME_I 10507649 10508158 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm3293_external
      tm3293_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 3293
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00000492
    Transcript: F59C6.7b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F59C6.7b.1:c.215+6_579+55del
        Intron_number: 2-4/5
        Exon_number: 3-4/6
      F59C6.7a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F59C6.7a.1:c.476+6_840+55del
        Intron_number: 6-8/10
        Exon_number: 7-8/11
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 2723/2724-3231/3232 (508 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele