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WormBase Tree Display for Variation: WBVar00251348

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Name Class

WBVar00251348NamePublic_nametm2464
Other_nameB0395.2.1:c.683+8_684-4del
HGVSgCHROMOSOME_X:g.16032785_16032986del
Sequence_detailsSMapS_parentSequenceB0395
Flanking_sequencesatttatagggacagctatccgaggtattcccagaactgaaaaacgtgatatgaaagccgc
Mapping_targetB0395
Source_location7CHROMOSOME_X1603278416032987Inferred_automaticallyNational_Bioresource_Project
Type_of_mutationDeletion
PCR_producttm2464_external
tm2464_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryFX
AuthorMitani S
DB_infoDatabaseNational_Bioresource_Projectseq2464
NBP_allele
StatusLive
AffectsGeneWBGene00007174
TranscriptB0395.2.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScB0395.2.1:c.683+8_684-4del
Intron_number6/9
IsolationMutagenTMP/UV
GeneticsMapX
DescriptionPhenotype_not_observedWBPhenotype:0000062Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkClassified as homozygous viable by the National Bioresource Project of Japan. Comment to the NBP from Dr. T. Kurzchalia: non CDS mutant and does not affect the gene.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
Laboratory_evidenceFX
WBPhenotype:0000886Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkComment from Dr. T. Kurzchalia to National Bioresource Project of Japan: non CDS mutant and does not affect the gene.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
Remark13665/13666-13867/13868 (202 bp deletion)
This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use.Paper_evidenceWBPaper00041807
MethodNBP_knockout_allele