WormBase Tree Display for Variation: WBVar00250895

WBVar00250895 Name: Public_name: tm1934
    Other_name: F54G2.1g.1:c.947_1565delinsGTTTG
      CE53218:p.Gln316ArgfsTer13
      CE53421:p.Gln358ArgfsTer13
      F54G2.1d.1:c.1073_1691delinsGTTTG
      F54G2.1f.1:c.947_1565delinsGTTTG
      CE37652:p.Gln438ArgfsTer13
      F54G2.1e.1:c.1073_1691delinsGTTTG
      CE53311:p.Gln358ArgfsTer13
      F54G2.1a.1:c.1313_1931delinsGTTTG
      CE53175:p.Gln316ArgfsTer13
    HGVSg: CHROMOSOME_X:g.2625721_2626780delinsCAAAC
  Sequence_details: SMap: S_parent: Sequence: F54G2
    Flanking_sequences: gggtcttgcactgattcgatgctccgatct gaagagtgaaccattgctccaaaccgtccg
    Mapping_target: F54G2
    Source_location: 7 CHROMOSOME_X 2625720 2626781 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: CAAAC
      Deletion
    PCR_product: tm1934_external
      tm1934_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 1934
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00018837
    Transcript: F54G2.1e.1 (11)
      F54G2.1a.1 (11)
      F54G2.1g.1 (11)
      F54G2.1d.1 (11)
      F54G2.1f.1 (11)
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Description: Phenotype: WBPhenotype:0000017 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Comment to the NBP from Dr. J. Kaplan: slight resistant to aldicarb. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: KP
        Affected_by: Molecule: WBMol:00003650 Person_evidence: WBPerson7743
              Curator_confirmed: WBPerson712
    Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0001012 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Comment to the NBP from Dr. J. Kaplan: normal response to pathogen. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: KP
  Remark: 9094/9095-CAAAC-10154/10155 (1060 bp deletion + 5 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele