WormBase Tree Display for Variation: WBVar00250297

WBVar00250297 Name: Public_name: tm1291
    HGVSg: CHROMOSOME_V:g.5700100_5700434delinsTTCGT
  Sequence_details: SMap: S_parent: Sequence: F25B4
    Flanking_sequences: aatcgaggcgaggtgacgccgcccccatct cattttttcagtgaaaaccttccatggaca
    Mapping_target: F25B4
    Source_location: 7 CHROMOSOME_V 5700099 5700435 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: TTCGT
      Deletion
    PCR_product: tm1291_external
      tm1291_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 1291
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00017772
      WBGene00197313
    Transcript: F25B4.9.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2-3/5
        Exon_number: 1-3/6
      F25B4.12 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-20
        Exon_number: 1/1
  Isolation: Mutagen: TMP/UV
  Genetics: Map: V
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson48
  Remark: 21611/21612-TTCGT-21946/21947 (335 bp deletion + 5 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele