WormBase Tree Display for Variation: WBVar00249867

WBVar00249867 Name: Public_name: tm841
    Other_name: C52B9.1b.1:c.867-15_973-150del
      C52B9.1a.1:c.930-15_1036-150del
      C52B9.1b.2:c.867-15_973-150del
    HGVSg: CHROMOSOME_X:g.4290489_4290911del
  Sequence_details: SMap: S_parent: Sequence: C52B9
    Flanking_sequences: aggttattcatggcgatttgaaattttaaa ccgtttttcaaaaccccatttgtaggcaaa
    Mapping_target: C52B9
    Source_location: 7 CHROMOSOME_X 4290488 4290912 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm841_external
      tm841_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 841
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00000510
    Transcript: C52B9.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C52B9.1a.1:c.930-15_1036-150del
        Intron_number: 7-8/10
        Exon_number: 8/11
      C52B9.1b.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C52B9.1b.2:c.867-15_973-150del
        Intron_number: 6-7/9
        Exon_number: 7/10
      C52B9.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C52B9.1b.1:c.867-15_973-150del
        Intron_number: 6-7/9
        Exon_number: 7/10
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson48
      WBPhenotype:0000315 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson48
        Remark: Comment from Dr. M. Chalfie: normal touch sensitivity. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson48
  Remark: 35053/35054-35476/35477 (423 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele