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WormBase Tree Display for Variation: WBVar00249736

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Name Class

WBVar00249736NamePublic_nametm706
Other_nameZK337.2.1:c.465-115_792+11del
HGVSgCHROMOSOME_I:g.14978675_14979177del
Sequence_detailsSMapS_parentSequenceZK337
Flanking_sequencesgctgccaagatttgagattttagctaaaaacacctacatctcaacattgtctatatttca
Mapping_targetZK337
Source_location7CHROMOSOME_I1497867414979178Inferred_automaticallyNational_Bioresource_Project
Type_of_mutationDeletion
PCR_producttm706_external
tm706_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryFX
AuthorMitani S
DB_infoDatabaseNational_Bioresource_Projectseq706
NBP_allele
StatusLive
AffectsGeneWBGene00013970
TranscriptZK337.2.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
VEP_impactHIGH
HGVScZK337.2.1:c.465-115_792+11del
Intron_number4-6/10
Exon_number5-6/11
IsolationMutagenTMP/UV
GeneticsMapI
DescriptionPhenotype_not_observedWBPhenotype:0000030Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkComment from Dr. P. Okkema to the National Bioresource Project of Japan: wild-type growth.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
WBPhenotype:0000062Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkClassified as homozygous viable by the National Bioresource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
WBPhenotype:0000886Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkComment from Dr. P. Okkema to the National Bioresource Project of Japan: no defects.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
Remark5308/5309-5811/5812 (503 bp deletion)
This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use.Paper_evidenceWBPaper00041807
MethodNBP_knockout_allele