WormBase Tree Display for Variation: WBVar00248962
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| WBVar00248962 | Evidence | Paper_evidence | WBPaper00026831 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | sy290 | |||||
| Other_name (12) | |||||||
| HGVSg | CHROMOSOME_IV:g.7686702C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | F33D4 | |||
| Flanking_sequences | attctaatgaatacaaatttgtttcaggtc | gcgatctggattttgcaaatgatgcatgca | |||||
| Mapping_target | F33D4 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00026831 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain (4) | |||||||
| Laboratory | PS | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00002173 | |||||
| Transcript | F33D4.2d.1 (12) | ||||||
| F33D4.2g.1 (12) | |||||||
| F33D4.2a.1 (12) | |||||||
| F33D4.2f.1 (12) | |||||||
| F33D4.2h.1 (12) | |||||||
| F33D4.2e.1 (12) | |||||||
| Interactor | WBInteraction000051431 | ||||||
| WBInteraction000051432 | |||||||
| WBInteraction000052166 | |||||||
| WBInteraction000052169 | |||||||
| WBInteraction000519131 | |||||||
| WBInteraction000538566 | |||||||
| WBInteraction000576760 | |||||||
| WBInteraction000586251 | |||||||
| Genetics | Interpolated_map_position | IV | 3.37733 | ||||
| Description | Phenotype (2) | ||||||
| Phenotype_not_observed | WBPhenotype:0000207 | Paper_evidence | WBPaper00028479 | ||||
| Curator_confirmed | WBPerson2987 | ||||||
| Remark | Figure 6A | Paper_evidence | WBPaper00028479 | ||||
| Curator_confirmed | WBPerson2987 | ||||||
| WBPhenotype:0000666 | Paper_evidence | WBPaper00042394 | |||||
| Curator_confirmed | WBPerson1777 | ||||||
| Remark | Do not exhibit overt ovulation or spermathecal transit defects; however, the sheath cell contractions are more frequent in these animals | Paper_evidence | WBPaper00042394 | ||||
| Curator_confirmed | WBPerson1777 | ||||||
| There were no detected changes in calcium dynamics, such as increased propagation speed nor increased frequency | Paper_evidence | WBPaper00042394 | |||||
| Curator_confirmed | WBPerson1777 | ||||||
| Reference | WBPaper00040692 | ||||||
| WBPaper00040893 | |||||||
| WBPaper00028479 | |||||||
| WBPaper00003017 | |||||||
| WBPaper00016949 | |||||||
| WBPaper00023320 | |||||||
| WBPaper00030553 | |||||||
| WBPaper00042394 | |||||||
| Method | Substitution_allele |
