WormBase Tree Display for Variation: WBVar00248908
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WBVar00248908 | Evidence | Paper_evidence | WBPaper00001756 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | sy96 | |||||
Other_name (6) | |||||||
HGVSg | CHROMOSOME_IV:g.6746097C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | Y73B6A | |||
Flanking_sequences | acaattcttatctaaaacatttaattttca | ctagtgaaagaactctttgggatcgcatca | |||||
Mapping_target | Y73B6A | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00001756 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00027280 | ||||||
WBStrain00030711 | |||||||
WBStrain00030713 | |||||||
WBStrain00030718 | |||||||
WBStrain00030812 | |||||||
Laboratory | PS | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00003030 | |||||
Transcript | Y73B6A.5c.1 | VEP_consequence | splice_acceptor_variant | ||||
VEP_impact | HIGH | ||||||
HGVSc | Y73B6A.5c.1:c.640-1G>A | ||||||
Intron_number | 5/13 | ||||||
Y73B6A.5e.1 | VEP_consequence | splice_acceptor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | Y73B6A.5e.1:c.589-1G>A | ||||||
Intron_number | 5/13 | ||||||
Y73B6A.5f.1 | VEP_consequence | splice_acceptor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | Y73B6A.5f.1:c.553-1G>A | ||||||
Intron_number | 3/10 | ||||||
Y73B6A.5b.1 | VEP_consequence | splice_acceptor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | Y73B6A.5b.1:c.811-1G>A | ||||||
Intron_number | 5/13 | ||||||
Y73B6A.5a.1 | VEP_consequence | splice_acceptor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | Y73B6A.5a.1:c.685-1G>A | ||||||
Intron_number | 4/12 | ||||||
Y73B6A.5d.1 | VEP_consequence | splice_acceptor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | Y73B6A.5d.1:c.760-1G>A | ||||||
Intron_number | 6/14 | ||||||
Interactor | WBInteraction000519051 | ||||||
WBInteraction000535559 | |||||||
WBInteraction000563586 | |||||||
WBInteraction000563587 | |||||||
WBInteraction000563588 | |||||||
Genetics | Interpolated_map_position | IV | 3.22834 | ||||
Mapping_data | In_multi_point | 1641 | |||||
1642 | |||||||
1929 | |||||||
3152 | |||||||
Description (2) | |||||||
Reference (20) | |||||||
Method | Substitution_allele |