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WormBase Tree Display for Variation: WBVar00248295

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Name Class

WBVar00248295EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00248295
Other_namesnp_Y105E8A[1]
F49B2.6.1:c.2146+143C>T
HGVSgCHROMOSOME_I:g.14336420C>T
Sequence_detailsSMapS_parentSequenceY105E8A
Flanking_sequencesatgataagaatggtatgcggtatctgaatagttataggtagtcttgagtagttctaggtaatcctgggtagttctaggtagtactgagtagttctaggtagtcctgagtagttctaggtagtcctgagtagttccaggtagtcctgagtagttcacgtagttctatgtagcccgtagtc
Mapping_targetY105E8A
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00009865
TranscriptF49B2.6.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF49B2.6.1:c.2146+143C>T
Intron_number11/18
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9301 VarS=CT
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y105E8.1
[20040130 db] this Allele was previously named snp_Y105E8.1
[20090224 db] this Variation was previously named snp_Y105E8[1]
[20090224 db] original Wicks name : Y105E8A:2419..3359@842 Psnp=0.9301 VarS=CT
[20090224 db] original Wicks id : eam59f08.s1@45,t,46
[20090224 db] Snip-SNP
MethodSNP_Wicks