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WormBase Tree Display for Variation: WBVar00246875

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Name Class

WBVar00246875NamePublic_nameWBVar00246875
Other_namesnp_Y26D4A[2]
cewivar00682609
Y26D4A.8.1:c.264+16_264+17insGCC
HGVSgCHROMOSOME_I:g.13084577_13084578insGGC
Sequence_detailsSMapS_parentSequenceY26D4A
Flanking_sequencesaatgggacactctgacaccaagtgatatggggaagacttacctcactctt
Mapping_targetY26D4A
Type_of_mutationInsertionGGC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
WGS_De_Bono
Million_mutation_project_reanalysis
WBStrain00006637From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
LaboratoryAX
AnalysisSNP_Wicks
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01351311
WBVar01958513
StatusLive
AffectsGeneWBGene00012505
TranscriptY26D4A.8.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY26D4A.8.1:c.264+16_264+17insGCC
Intron_number3/4
ReferenceWBPaper00004703
WBPaper00037807
RemarkPredicted SNP: Psnp=0.9221 VarI3=GGC
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y26D4.2
[20040130 db] this Allele was previously named snp_Y26D4.2
[20090224 db] this Variation was previously named snp_Y26D4[2]
[20090224 db] original Wicks name : Y26D4A:25169..25957@424 Psnp=0.9221 VarI3=GGC
[20090224 db] original Wicks id : yy62f08.s1@374,c,59
[20090224 db] Snip-SNP
MethodSNP_Wicks