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WormBase Tree Display for Variation: WBVar00246383

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Name Class

WBVar00246383EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00246383
Other_namesnp_T23F2[3]
T23F2.1b.1:c.199+23dup
T23F2.1a.1:c.157+23dup
HGVSgCHROMOSOME_X:g.5493939dup
Sequence_detailsSMapS_parentSequenceT23F2
Flanking_sequencestggtatgtgaaatattcaaaaaaaacatcatatatgtgaaacatttgctt
Mapping_targetT23F2
Type_of_mutationInsertionA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00044623
TranscriptT23F2.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT23F2.1b.1:c.199+23dup
Intron_number2/8
T23F2.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT23F2.1a.1:c.157+23dup
Intron_number1/8
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9221 VarI1=A
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_T23F2.3
[20040130 db] this Allele was previously named snp_T23F2.3
[20090224 db] original Wicks name : T23F2:1285..2227@387 Psnp=0.9221 VarI1=A
[20090224 db] original Wicks id : yw09e06.s1@319,a,59
MethodSNP_Wicks