WormBase Tree Display for Variation: WBVar00246383
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WBVar00246383 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00246383 | |||
Other_name | snp_T23F2[3] | ||||
T23F2.1b.1:c.199+23dup | |||||
T23F2.1a.1:c.157+23dup | |||||
HGVSg | CHROMOSOME_X:g.5493939dup | ||||
Sequence_details | SMap | S_parent | Sequence | T23F2 | |
Flanking_sequences | tggtatgtgaaatattcaaaaaaaa | catcatatatgtgaaacatttgctt | |||
Mapping_target | T23F2 | ||||
Type_of_mutation | Insertion | A | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00044623 | |||
Transcript | T23F2.1b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T23F2.1b.1:c.199+23dup | ||||
Intron_number | 2/8 | ||||
T23F2.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T23F2.1a.1:c.157+23dup | ||||
Intron_number | 1/8 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9221 VarI1=A | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_T23F2.3 | |||||
[20040130 db] this Allele was previously named snp_T23F2.3 | |||||
[20090224 db] original Wicks name : T23F2:1285..2227@387 Psnp=0.9221 VarI1=A | |||||
[20090224 db] original Wicks id : yw09e06.s1@319,a,59 | |||||
Method | SNP_Wicks |