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WormBase Tree Display for Variation: WBVar00242564

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Name Class

WBVar00242564EvidencePaper_evidenceWBPaper00035158
NamePublic_namesa330
Other_nameF22E12.4b.3:c.112C>T
F22E12.4a.1:c.112C>T
F22E12.4b.2:c.112C>T
CE27755:p.Gln38Ter
F22E12.4b.1:c.112C>T
CE38328:p.Gln38Ter
CE31342:p.Gln38Ter
F22E12.4d.1:c.112C>T
HGVSgCHROMOSOME_V:g.10468980C>T
Sequence_detailsSMapS_parentSequenceF22E12
Flanking_sequencesagtcaaccatcttcttctacagctgttttaagtgtacatattgtggaagctcgtgcacatc
Mapping_targetF22E12
Type_of_mutationSubstitutionctPaper_evidenceWBPaper00000635
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryJT
StatusLive
AffectsGeneWBGene00001178
TranscriptF22E12.4b.3VEP_consequencestop_gained
VEP_impactHIGH
HGVScF22E12.4b.3:c.112C>T
HGVSpCE31342:p.Gln38Ter
cDNA_position112
CDS_position112
Protein_position38
Exon_number2/11
Codon_changeCag/Tag
Amino_acid_changeQ/*
F22E12.4b.2VEP_consequencestop_gained
VEP_impactHIGH
HGVScF22E12.4b.2:c.112C>T
HGVSpCE31342:p.Gln38Ter
cDNA_position118
CDS_position112
Protein_position38
Exon_number3/9
Codon_changeCag/Tag
Amino_acid_changeQ/*
F22E12.4a.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScF22E12.4a.1:c.112C>T
HGVSpCE27755:p.Gln38Ter
cDNA_position120
CDS_position112
Protein_position38
Exon_number3/12
Codon_changeCag/Tag
Amino_acid_changeQ/*
F22E12.4b.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScF22E12.4b.1:c.112C>T
HGVSpCE31342:p.Gln38Ter
cDNA_position120
CDS_position112
Protein_position38
Exon_number3/11
Codon_changeCag/Tag
Amino_acid_changeQ/*
F22E12.4d.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScF22E12.4d.1:c.112C>T
HGVSpCE38328:p.Gln38Ter
cDNA_position120
CDS_position112
Protein_position38
Exon_number3/11
Codon_changeCag/Tag
Amino_acid_changeQ/*
GeneticsInterpolated_map_positionV2.56523
DescriptionPhenotype (4)
Phenotype_not_observedWBPhenotype:0000006Paper_evidenceWBPaper00035158
Curator_confirmedWBPerson2021
Remarksa330 did not cause egg-laying defectsPaper_evidenceWBPaper00035158
Curator_confirmedWBPerson2021
Reference (3)
MethodSubstitution_allele