WormBase Tree Display for Variation: WBVar00241146

WBVar00241146 Evidence: Paper_evidence: WBPaper00005045
  Name: Public_name: q507
    Other_name: CE27480:p.Gln200_Val209delinsLeu
      Y54E10A.4a.1:c.-44_-18del
      Y54E10A.4a.2:c.-44_-18del
      Y54E10A.4b.1:c.599_625del
    HGVSg: CHROMOSOME_I:g.3213074_3213100del
  Sequence_details: SMap: S_parent: Sequence: Y54E10A
    Flanking_sequences: ttgtcaagaaccatcggaacgagaacaatc ttggtggaatctcgcatatgatgaatcgga
    Mapping_target: Y54E10A
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: JK
    Status: Live
  Affects: Gene: WBGene00001481
    Transcript: Y54E10A.4a.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E10A.4a.1:c.-44_-18del
        cDNA_position: 611-637
        Exon_number: 5/11
      Y54E10A.4b.1 VEP_consequence: inframe_deletion
        VEP_impact: MODERATE
        HGVSc: Y54E10A.4b.1:c.599_625del
        HGVSp: CE27480:p.Gln200_Val209delinsLeu
        cDNA_position: 611-637
        CDS_position: 599-625
        Protein_position: 200-209
        Exon_number: 6/10
        Codon_change: cAACGAGTCGTCTCCAACAAAGTATTCGtt/ctt
        Amino_acid_change: QRVVSNKVFV/L
      Y54E10A.4a.2 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E10A.4a.2:c.-44_-18del
        cDNA_position: 85-111
        Exon_number: 1/7
  Isolation: Mutagen: UV
  Genetics: Interpolated_map_position: I -4.47298
  Reference: WBPaper00005045
  Method: Deletion_allele