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WormBase Tree Display for Variation: WBVar00239418

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Name Class

WBVar00239418EvidencePaper_evidenceWBPaper00006174
NamePublic_namepk1601
Sequence_detailsType_of_mutationDeletion
SeqStatusPending_curation
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00047164
LaboratoryNL
StatusLive
AffectsGeneWBGene00001464
DescriptionPhenotypeWBPhenotype:0000131Paper_evidenceWBPaper00053388
Curator_confirmedWBPerson46589
RemarkFigure 5C, decreased dauer entry in flp mutantsPaper_evidenceWBPaper00053388
Curator_confirmedWBPerson46589
Phenotype_assayStrainWBStrain00047164Paper_evidenceWBPaper00053388
Curator_confirmedWBPerson46589
Control_strainWBStrain00000001Paper_evidenceWBPaper00053388
Curator_confirmedWBPerson46589
TreatmentAnimals were exposed to crude pheremone to induce entry into the dauer larva statePaper_evidenceWBPaper00053388
Curator_confirmedWBPerson46589
ReferenceWBPaper00006174
WBPaper00053388
Remarkpk1601 deletes 1.4 kb of flp-21 sequence, including 1.2 kb upstream of the gene, the initiation codon, the signal peptide sequence and most of the FLP-21 proprotein sequence. Exact coordinates of deletion not specified in paper 14555955Curator_confirmedWBPerson1845
Manually curated Gene associations preserved as a text remark so that VEP is the canonical predictor of consequence: WBGene00001464 Genomic_neighbourhoodPaper_evidenceWBPaper00006174
MethodDeletion_allele