WormBase Tree Display for Variation: WBVar00239323
expand all nodes | collapse all nodes | view schema
WBVar00239323 | Evidence | Paper_evidence | WBPaper00031936 | ||
---|---|---|---|---|---|
Name | Public_name | pk610 | |||
Other_name (2) | |||||
HGVSg | CHROMOSOME_IV:g.10406904_10407864del | ||||
Sequence_details | SMap | S_parent | Sequence | R10H10 | |
Flanking_sequences | aaaacaacaggaataacagaagttttgttt | caaagaccagaaaaagattttttcccgagt | |||
Mapping_target | R10H10 | ||||
Type_of_mutation | Deletion | ||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00028939 | ||||
Laboratory | NL | ||||
Status | Live | ||||
Affects | Gene | WBGene00001669 | |||
Transcript | R10H10.5.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | R10H10.5.1:c.565_933-276del | ||||
cDNA_position | 576-? | ||||
CDS_position | 565-? | ||||
Protein_position | 189-? | ||||
Intron_number | 5-7/8 | ||||
Exon_number | 5-7/9 | ||||
Isolation | Mutagen | EMS | |||
Genetics | Interpolated_map_position | IV | 4.5874 | ||
Mapping_data | In_multi_point | 4373 | |||
Description (2) | |||||
Reference | WBPaper00043908 | ||||
WBPaper00031936 | |||||
WBPaper00003465 | |||||
WBPaper00030770 | |||||
Method | Deletion_allele |