WormBase Tree Display for Variation: WBVar00237125
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| WBVar00237125 | Name | Public_name | WBVar00237125 | ||
|---|---|---|---|---|---|
| Other_name | pas48901 | ||||
| H04D03.7.1:c.-79del | |||||
| HGVSg | CHROMOSOME_III:g.10446771del | ||||
| Sequence_details | SMap | S_parent | Sequence | H04D03 | |
| Flanking_sequences | aaaaaccaaaaaaaaaaacgaaaatcaacaccattggtactaatgtttcagaaccacttgttagcaatttcaacaactattagctttttttaaattttcaataaaaacgattttaagaacttaccctgtcgctctgagcagagaatctattttgaaaaacttcaatttaatgtaacgcttcgaaaaatcgtcggaaattggggtaagtagaaaatgtgccattacactcaaaatatcatattcaagttcttcgaattcctccagcttacaaatgaaccagtctatgtcccaaaatttgag | cattccagaatagttcttcgtcaactgaagtcagaacgtgtaataattttcaaaccggaacaaaagtgtttcgttggttttccattccttgtctcactacctcgcaaaatagatattggtgtcttttaatcaagtctatgatgtcattagaatcgatgaacccttggtttaggcatttttctaccacactgaaagcatggaacaaggtccatttttcgtgtttatgtcgaatcaaaagccgtacagcttttctgacaatcttctcatagtttaatttacaaaacttcgaatcaatgagt | |||
| Mapping_target | H04D03 | ||||
| Type_of_mutation | Deletion | A | |||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | ||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00305993 | |||
| Transcript | H04D03.7.1 | VEP_consequence | 5_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | H04D03.7.1:c.-79del | ||||
| cDNA_position | 60 | ||||
| Exon_number | 1/4 | ||||
| Method | WGS_Pasadena_Quinlan |
