WormBase Tree Display for Variation: WBVar00236878
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WBVar00236878 | Name | Public_name | WBVar00236878 | ||
---|---|---|---|---|---|
Other_name | pas48654 | ||||
ZC434.5.2:c.1505+181del | |||||
ZC434.5.1:c.1505+181del | |||||
HGVSg | CHROMOSOME_I:g.10338159del | ||||
Sequence_details | SMap | S_parent | Sequence | ZC434 | |
Flanking_sequences | gactgtcgaaggattgaaacaatttattgttgcacaaggaggatcgagatcagttgtcatgatggaatgggataagatttgggcgttcaataagaaggttattgatccagttgcgccaaggtaaattttagattcaagagaaaattaatatttcaactgcaagactaattcagataggtttagggccggtcacagaaaattttgaaccgacaaaaaacagaacatcgaatttctctggagaaaaaaaaacaacaaaaaaaacaaattattttttctcccgatcatatattttttcggtcc | aaaaaccacagatatgtgtgtgtagactgcgattttttcgattacaaaaaaagcgaaaaacgaaaaacttctgaagtttacaacgtcattttgtaaaattttatatgttacccttacttgcactatagttatacttttgagtgcaatttttttaatattttggaaacaagtgcaaaatttgaaaattaaaaaaaatttttcgttttttttttcaacgaaaacgaaaaatcttcaacgctgtggagactttataaactcctagagaacatatggtatttatatggctagtttatggtttt | |||
Mapping_target | ZC434 | ||||
Type_of_mutation | Deletion | A | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | ||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Status | Live | ||||
Affects | Gene | WBGene00001337 | |||
Transcript | ZC434.5.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZC434.5.1:c.1505+181del | ||||
Intron_number | 3/8 | ||||
ZC434.5.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZC434.5.2:c.1505+181del | ||||
Intron_number | 3/7 | ||||
Method | WGS_Pasadena_Quinlan |