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WormBase Tree Display for Variation: WBVar00236821

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Name Class

WBVar00236821NamePublic_nameWBVar00236821
Other_namepas48597
C34F6.10b.1:c.102-1298del
C34F6.10c.1:c.102-1298del
C34F6.10d.1:c.-16-629del
C34F6.10a.1:c.-16-629del
HGVSgCHROMOSOME_X:g.11238010del
Sequence_detailsSMapS_parentSequenceC03A3
Flanking_sequencesatctaaatcaaagagtgtcgaattctcatctttagtgatatatgtgtgcgcacgtattgggttgaaaatagatgtgacgttatataacctcaaaacctagcaagaacaattttggaaatttaagaatcatcaatcaatctagctcttctaaaaatacacgtcatctggcgtgaattttttgggcgaggaaaagcgaggatgagaagcaggttttgtaaaaataactagatgagacaaaataaatgagagggagtatactgctgtgttgcattgcagagaatccccagaagttctgggtgcttttttgacgaaaaagttgctgtggcatgttactcagcccacaggcattgaagatgatgctcagcaatgattgagccaactagcttctggcagggtcgcatttattcttgcacggatgagacatgttacataataagatgcattttatctagtatgttttgatgtaacctattagaaaaaaacctaaaactccgcatatcatgtagctaatcactaaactctttacaatcaaatattgccaaacaataaaatcctcaaatgtaaacaaaaagaaaattggcaaaagaataggaaacggt
Mapping_targetC03A3
Type_of_mutationDeletionT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004604From_analysisWGS_Pasadena_Quinlan
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
StatusLive
AffectsGeneWBGene00007944
TranscriptC34F6.10d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC34F6.10d.1:c.-16-629del
Intron_number1/16
C34F6.10c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC34F6.10c.1:c.102-1298del
Intron_number2/15
C34F6.10b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC34F6.10b.1:c.102-1298del
Intron_number2/16
C34F6.10a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC34F6.10a.1:c.-16-629del
Intron_number1/17
MethodWGS_Pasadena_Quinlan