WormBase Tree Display for Variation: WBVar00235867

WBVar00235867 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00235867
    Other_name: pas47643
      cewivar00679690
      C45E1.1a.2:c.-5-559del
      C45E1.1c.1:c.14-559del
    HGVSg: CHROMOSOME_I:g.3103804del
  Sequence_details: SMap: S_parent: Sequence: C45E1
    Flanking_sequences: gggttttctacccaaaatggcagaaaatagtgtcaatttaccaaatataactgctagaattattatagaatttttctaaattttttatatgagattttaagaattttgcgataaaaatttgaaataactgattttttgttgaatttgtgcacacaattttcacatttttcggctaaacggaggttttttattattatttttgtattaaatgacagaaaataaaccgtaatgcccgaaaataactgttaaaaaatttatagaatttttctaaattttttcataaaaatttgaaatgactgg tttttttttggaatttcggcgtaaaattttaacgtttttcggctaaacggaggttttttctcattttgtatggttcgaaacattttttttttcaaaatttaagtcactttttccgcaaaacggaaaaatgacttgaaatttgccgccgaaaatcgggaaaaatgttgaaactaggtagttaatttgcgcaaaaaatttaacaatagtctagccatttgaactttttaatgcaaaattaaacaaaaattatttgaaaatttagaaaaattctataaattatttaacagttatattcggtc
    Mapping_target: C45E1
    Type_of_mutation: Deletion: T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          Million_mutation_project_reanalysis
      WBStrain00004604 From_analysis: WGS_Pasadena_Quinlan
    Laboratory: AX
    Person: WBPerson6900
    Analysis: WGS_Pasadena_Quinlan
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01414877
    Status: Live
  Affects: Gene: WBGene00003654
    Transcript: C45E1.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C45E1.1c.1:c.14-559del
        Intron_number: 1/8
      C45E1.1a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C45E1.1a.2:c.-5-559del
        Intron_number: 1/10
  Reference: WBPaper00037807
  Method: WGS_Pasadena_Quinlan