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WormBase Tree Display for Variation: WBVar00233473

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Name Class

WBVar00233473NamePublic_nameWBVar00233473
Other_namepas45249
T23F4.2b.1:c.249+89del
T23F4.2a.1:c.249+89del
T23F4.2d.1:c.24+89del
T23F4.2c.1:c.24+89del
HGVSgCHROMOSOME_II:g.1164064del
Sequence_detailsSMapS_parentSequenceT23F4
Flanking_sequencesaaaattaaaaaaaaaaagcaaaaaatttttcaaaaaaaatttcaaaaatttttcaaaaaaaaaaattctaaaaattttcagcttcccgccacaactctaccaagcgtactccatcatggcgtccacttttcactggacagggtaaaaagaaaagttcaaagcccaaatatctacaggatggccggaaaatgacagaagatgggcatgacgaggttggtattttttctatttttacaacaaaaaaatttgtaaaaatctgagctttttctgtttaaacatgctattctagccaaaaaaaaaaatcaaaaatttgaattcccgctgaccccacgctgcaagcacgctccaatgctaaattagcaatggagcgcgtttggccagccggatttcagaatttttaaattcaaattgaagtctttaggccaatttctgtaatttttcagccaaataagctttgggaagagcttttcctccgttcattcgcccacaaaattgagcaggaaatctcgtcgccgagcccacttgaagcacacaaaaatctgaattcggaactctcaaaactcaatattcaaggtaaatttttggtttttcttaatttt
Mapping_targetT23F4
Type_of_mutationDeletionG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004604From_analysisWGS_Pasadena_Quinlan
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
StatusLive
AffectsGeneWBGene00020740
TranscriptT23F4.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT23F4.2a.1:c.249+89del
Intron_number3/6
T23F4.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT23F4.2b.1:c.249+89del
Intron_number3/6
T23F4.2d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT23F4.2d.1:c.24+89del
Intron_number1/3
T23F4.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT23F4.2c.1:c.24+89del
Intron_number1/3
MethodWGS_Pasadena_Quinlan