WormBase Tree Display for Variation: WBVar00232753
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| WBVar00232753 | Name | Public_name | WBVar00232753 | ||
|---|---|---|---|---|---|
| Other_name | pas44529 | ||||
| haw137859 | |||||
| cewivar00102305 | |||||
| Y53F4B.22a.1:c.198G>A | |||||
| CE35675:p.Gly66= | |||||
| HGVSg | CHROMOSOME_II:g.15120581G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y53F4B | |
| Flanking_sequences | actgttattttatctttcaggttacaaaatggactacgacgtcatcgccaatcagcctgtggtcatcgacaatggctccggagtcattaaggctggtttcgccggagaacagcagccaaaggtaggcaataacgaatcaaaacttgagatttttgaattttgaattttaaatcatcttttaattcattttttacaggttcgcttcgccaacttcgtcggacgaccgaaatatcacagagtaatggccggagggctcgacggagacattttcatcggaccaaaggccgaatcaaaccgcgg | ttgttctcaatcgaatacccaatggaacacggaatcgtcaataactggagcgatatggaaaaaatttgggagtacattttcggacaggatcagctgaaaatcttcccagaagagcatccagttctgctcaccgacgccccattgaatccgttgaagaaccgcgagcgatctgctgagatcttcttcgaaacgttcaatgttccagcgttatatattcaaatgcaagctgtgctatcgctgtacgccaccggaagaacgaccggagtcgttttggattcaggagacggagtcacacatgct | |||
| Mapping_target | Y53F4B | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004602 | From_analysis | WGS_De_Bono | |||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| WBStrain00022850 | From_analysis | WGS_De_Bono | |||
| Million_mutation_project_reanalysis | |||||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00557724 | |||
| WBVar01321875 | |||||
| WBVar01386261 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00013168 | |||
| Transcript | Y53F4B.22a.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y53F4B.22a.1:c.198G>A | ||||
| HGVSp | CE35675:p.Gly66= | ||||
| cDNA_position | 206 | ||||
| CDS_position | 198 | ||||
| Protein_position | 66 | ||||
| Exon_number | 3/7 | ||||
| Codon_change | ggG/ggA | ||||
| Amino_acid_change | G | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
