WormBase Tree Display for Variation: WBVar00232714
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| WBVar00232714 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00232714 | |||
| Other_name | pas44490 | ||||
| cewivar00100509 | |||||
| Y39G8C.4.1:c.671-560C>A | |||||
| HGVSg | CHROMOSOME_II:g.14092236G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y39G8C | |
| Flanking_sequences | ttccatttcaatttatgagggaagcaagaaatccgtgtttcaggttgcggaaaatttttccgaaattgcaaagaattttaagctccgtccactaaatggttggtctcgatatgctccgcccattttctgagaaatgttttttgcgggaaattcaaattttctcagagaaaacattttttggcggggatttcaaattttctaaaaaaaagtaatttttgcgggaaattcaaattttctcagagaaaacattttggcggggaattcaaatttaccacatttttaaagatttcaaaactacat | aatttcttaaaccacgcccacaaaatggacacttctcaataaactccgcccaaaaaaaaatggatatgatctcagtttcgcgccaaaaaatgtatacttttcagaatgcatgcgcattttaggccacgcccataaaatggacacttctcaataaactccgcccaaaaaaaaatggatatgatctcagtttcgcgccaaaaaatgtatacttttcagaatgcatgcgcattttaggccacgcccataaaatggacacttctcaataaactccgtccaaaaaaaaatggatatgatctcagt | |||
| Mapping_target | Y39G8C | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (95) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01442079 | |||
| WBVar01252379 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000662 | |||
| Transcript | Y39G8C.4.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y39G8C.4.1:c.671-560C>A | ||||
| Intron_number | 4/6 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
