WormBase Tree Display for Variation: WBVar00232633
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WBVar00232633 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00232633 | |||
Other_name | pas44409 | ||||
cewivar00101908 | |||||
W01D2.2b.1:c.230-39C>T | |||||
W01D2.2a.1:c.230-39C>T | |||||
HGVSg | CHROMOSOME_II:g.14817444G>A | ||||
Sequence_details | SMap | S_parent | Sequence | W01D2 | |
Flanking_sequences | aactcttcgggatccgtcctcgcgtagatcgcacgtagattatcgattatttgctccttttttatgtcaagtgtgaataatgacgtgtgcgacttctttttcacctttaacgcgtcggtttgtgtgctaatcgatagagtttccggcatggcttcttcgtcccattcgggatcctctactgtgtcgccttgtaccgcgcgtggattcattccgacgtcaaggcatcgcgttagtcggcatgagcggcacgcgtttcgttgttctgaaaatagccaagttgcgattggagcgcgttcgtcg | ttggctttgcaattttcaccaaaaaattactgtacctggtctcgacacgacgaatttttgttaaatgcaaaaaggtgtgcgcctttaaagaatactgtagtttcaaacttttgttgaagtggaattttcatcgatttttcatactttttctcatgaattaggaaaattgaagtgtttttattgatatatttaagttttttttaaataattaacaaaatttttgatgaatgaaaaaaggtgcgcgcctttaaagagcactgtagtttcaaactttcgttgcagtggaatttccatcgattt | |||
Mapping_target | W01D2 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (28) | |||||
Laboratory | AX | ||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01385429 | |||
WBVar01253813 | |||||
WBVar01321064 | |||||
Status | Live | ||||
Affects | Gene | WBGene00003651 | |||
Transcript | W01D2.2b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W01D2.2b.1:c.230-39C>T | ||||
Intron_number | 3/7 | ||||
W01D2.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W01D2.2a.1:c.230-39C>T | ||||
Intron_number | 3/7 | ||||
Reference | WBPaper00037807 | ||||
Method | WGS_Pasadena_Quinlan |