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WormBase Tree Display for Variation: WBVar00232633

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Name Class

WBVar00232633EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00232633
Other_namepas44409
cewivar00101908
W01D2.2b.1:c.230-39C>T
W01D2.2a.1:c.230-39C>T
HGVSgCHROMOSOME_II:g.14817444G>A
Sequence_detailsSMapS_parentSequenceW01D2
Flanking_sequencesaactcttcgggatccgtcctcgcgtagatcgcacgtagattatcgattatttgctccttttttatgtcaagtgtgaataatgacgtgtgcgacttctttttcacctttaacgcgtcggtttgtgtgctaatcgatagagtttccggcatggcttcttcgtcccattcgggatcctctactgtgtcgccttgtaccgcgcgtggattcattccgacgtcaaggcatcgcgttagtcggcatgagcggcacgcgtttcgttgttctgaaaatagccaagttgcgattggagcgcgttcgtcgttggctttgcaattttcaccaaaaaattactgtacctggtctcgacacgacgaatttttgttaaatgcaaaaaggtgtgcgcctttaaagaatactgtagtttcaaacttttgttgaagtggaattttcatcgatttttcatactttttctcatgaattaggaaaattgaagtgtttttattgatatatttaagttttttttaaataattaacaaaatttttgatgaatgaaaaaaggtgcgcgcctttaaagagcactgtagtttcaaactttcgttgcagtggaatttccatcgattt
Mapping_targetW01D2
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (28)
LaboratoryAX
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01385429
WBVar01253813
WBVar01321064
StatusLive
AffectsGeneWBGene00003651
TranscriptW01D2.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW01D2.2b.1:c.230-39C>T
Intron_number3/7
W01D2.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW01D2.2a.1:c.230-39C>T
Intron_number3/7
ReferenceWBPaper00037807
MethodWGS_Pasadena_Quinlan