WormBase Tree Display for Variation: WBVar00232451
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WBVar00232451 | Name | Public_name | WBVar00232451 | ||
---|---|---|---|---|---|
Other_name | pas44227 | ||||
cewivar00101571 | |||||
F19H8.2.1:c.80+16A>T | |||||
F19H8.1a.1:c.2706+1448T>A | |||||
F19H8.2.2:c.80+16A>T | |||||
HGVSg | CHROMOSOME_II:g.14605523T>A | ||||
Sequence_details | SMap | S_parent | Sequence | F19H8 | |
Flanking_sequences | agagtcttccttgagattcgtgggtggaatttgaagaatcgtcaaggagcaaagcttgaactttgtctggttgggaacaagcctcacattgacataggttaatatagcaggccgagtcagagaagtagaagcaatagttggcatcgctgaaatatttttgtcaataaatttagtcgaaacgttaaaagtacaataatctaaaacggtattttcagcctctcatttaaaattcctgtttatattaattcttcgaatacataacagtaagtaacaaaatgatggtcctccaacactttcatt | aaaaaaaaaactcacagaatgtcgcaaatatccgccgtctccaaaactccaacaaaagtcagcgaaataaacaaaaccaccaaccgtgataccatcttgtcaaaaaagttgaaaatagagatagcgatatattgtgtctccgcacctgtccttgaaaaataaaatttcaaattcgcaaacctcccccttattctggcaaatggatgagaagggtgacctactttttctaccgatattggaattttagtagcagttgaaaatgaggaaaagcgaactgtaggaggaaagtgagaaaaaaag | |||
Mapping_target | F19H8 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (22) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00008963 | |||
WBGene00006603 | |||||
Transcript | F19H8.2.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F19H8.2.2:c.80+16A>T | ||||
Intron_number | 3/7 | ||||
F19H8.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F19H8.1a.1:c.2706+1448T>A | ||||
Intron_number | 8/15 | ||||
F19H8.2.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F19H8.2.1:c.80+16A>T | ||||
Intron_number | 2/6 | ||||
Method | WGS_Pasadena_Quinlan |