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WormBase Tree Display for Variation: WBVar00232451

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Name Class

WBVar00232451NamePublic_nameWBVar00232451
Other_namepas44227
cewivar00101571
F19H8.2.1:c.80+16A>T
F19H8.1a.1:c.2706+1448T>A
F19H8.2.2:c.80+16A>T
HGVSgCHROMOSOME_II:g.14605523T>A
Sequence_detailsSMapS_parentSequenceF19H8
Flanking_sequencesagagtcttccttgagattcgtgggtggaatttgaagaatcgtcaaggagcaaagcttgaactttgtctggttgggaacaagcctcacattgacataggttaatatagcaggccgagtcagagaagtagaagcaatagttggcatcgctgaaatatttttgtcaataaatttagtcgaaacgttaaaagtacaataatctaaaacggtattttcagcctctcatttaaaattcctgtttatattaattcttcgaatacataacagtaagtaacaaaatgatggtcctccaacactttcattaaaaaaaaaactcacagaatgtcgcaaatatccgccgtctccaaaactccaacaaaagtcagcgaaataaacaaaaccaccaaccgtgataccatcttgtcaaaaaagttgaaaatagagatagcgatatattgtgtctccgcacctgtccttgaaaaataaaatttcaaattcgcaaacctcccccttattctggcaaatggatgagaagggtgacctactttttctaccgatattggaattttagtagcagttgaaaatgaggaaaagcgaactgtaggaggaaagtgagaaaaaaag
Mapping_targetF19H8
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (22)
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00008963
WBGene00006603
TranscriptF19H8.2.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF19H8.2.2:c.80+16A>T
Intron_number3/7
F19H8.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF19H8.1a.1:c.2706+1448T>A
Intron_number8/15
F19H8.2.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF19H8.2.1:c.80+16A>T
Intron_number2/6
MethodWGS_Pasadena_Quinlan