WormBase Tree Display for Variation: WBVar00232025
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| WBVar00232025 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00232025 | |||
| Other_name | pas43801 | ||||
| cewivar00100271 | |||||
| F01D5.9.2:c.178+16A>T | |||||
| F01D5.9.1:c.178+16A>T | |||||
| HGVSg | CHROMOSOME_II:g.14016584T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | F01D5 | |
| Flanking_sequences | atgtcatattcactactcttgttgatcagggcattgctttcgagaactttctgaaaaatgtgaaaattttgtgcgcccgacatattacgggtttgtaccttattagcttcaggtgtcaaaacgatgaccattgggtatggtcccatccagaaagcagctaaggatgagccttttgtggagtactccaatccccagttgtagagttgaagcgcgaattctggaaatttgtttttaaaacatttttttttgtttcggtgattcaaattctagaataaaattctgtagttttttgaacaaatt | aaaaaaaaacctcaccaactggatccattttgaactgaaaagttgtgcctagcaggggtaaagccagaggaccatcgattttggacataagatggtagagccgcattctttcctgaaaaaaatgtttattacggtttttatacatacttttaaggatatttttgaaatttcgatctttgaaaaagtggaaaaaaatttttggatatttttcaaaaaaaaatttcttttggaaatttttgaaattttttgaattttttttttcaaatttatgttctttaataagaatgtacttaccttcac | |||
| Mapping_target | F01D5 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (153) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01442037 | |||
| WBVar01318877 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00008499 | |||
| Transcript | F01D5.9.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F01D5.9.1:c.178+16A>T | ||||
| Intron_number | 3/10 | ||||
| F01D5.9.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F01D5.9.2:c.178+16A>T | ||||
| Intron_number | 3/10 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
