WormBase Tree Display for Variation: WBVar00230703
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| WBVar00230703 | Name | Public_name | WBVar00230703 | ||
|---|---|---|---|---|---|
| Other_name | pas42479 | ||||
| cewivar00016174 | |||||
| Y46G5A.22b.1:c.*146A>C | |||||
| Y46G5A.22a.1:c.*66A>C | |||||
| HGVSg | CHROMOSOME_II:g.12816873T>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y46G5A | |
| Flanking_sequences | caagtgtgttaaaaaatttaaatgtccaaactttggctcagattaaaaaatagtcagtttaaaaattatgacttcctgactgaaaataactgaaatagttcgttcaaaagttcaaagaatagccacatcacaccattccaagaaactttccaagcatgttacatttaaaaaaaaacgagaacaagtgaaaaaagttgggtcagcagcagaagacacatagactgataagaaaatgatacgcagagagacagtgagagtacgtgagcacatcgccaaactattttattatcacccactaaa | gaggaagagagaaaaagagaaaaaagtccagaattcgagaagttgagagaaaaatcgaagcccatctagttttgtggaatcggtgtcaaattggggcgagcttgtgagagcacgtggtccacgaacgagcaggtgacgtcacacattagacggcgcgaacggcagtatctggcagcaaactcacagtaggaggcctggaagtaaactaataaaatattttcttttagactgttaagctcaaaaaatcactgacaaaaatgatcgcatccattctagtgaacatattggcaattgacataa | |||
| Mapping_target | Y46G5A | ||||
| Type_of_mutation | Substitution | T | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (69) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01441077 | |||
| WBVar01441076 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00012912 | |||
| Transcript | Y46G5A.22b.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y46G5A.22b.1:c.*146A>C | ||||
| cDNA_position | 965 | ||||
| Exon_number | 7/7 | ||||
| Y46G5A.22a.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y46G5A.22a.1:c.*66A>C | ||||
| cDNA_position | 995 | ||||
| Exon_number | 8/8 | ||||
| Method | WGS_Pasadena_Quinlan |
